As for a labview wrapper to opencv, I'm only aware of this one (once downloaded but never tried). I'ts all: commercial, closed-source, only windows (and probably only x86), bound to an old opencv version. Given the complexity of opencv though, I think any full scale interface to it would be a major project.
I'm not familiar with OMR, but I have done quite some OCR of historical books. For that I actually relied on an existing OS package, tesseract, which is not even the best performing around, but would never have dreamed to implement OCR from scratch using labview [yes there may be some IMAQ "OCR"; but seriously]. Well maybe I could have used labview for just some routinary image rectification and preprocessing task, but it turns there are better ready made tools around, e.g. scantailor. I don't know where you stand in this respect, but if there is some decent OMR around I would stick to it and at best call it from labview if I really had to.
Out of curiosity because I don't know OMR workings: does removing the staffs in preprocessing really help the recognition, not complicate it? Well ok, the rhythm of your music is weird, I don't see any two bars with the same duration...